Experiment Detail :: Allen Brain Atlas: Developing Mouse Brain

This web browser is not configured to support JavaScript.
Many features may not operate correctly.
Please reconfigure your web browser to enable JavaScript, then refresh this page.

ALLEN INSTITUTE

BRAIN ATLAS

HOME
Developing Mouse Brain
- Mouse Brain
  Developing Mouse Brain
  Mouse Spinal Cord
  
  Human Brain
  Developing Human Brain
  Glioblastoma
  Aging, Dementia and TBI
  
  Non-Human Primate
  
  Mouse Brain Connectivity
  Cell Types
  Brain Observatory
TOOLS
- Overview
- Reference Atlases
- API
- SDK

ISH Data Reference Atlas AGEA Brain Explorer Supplementary Data Documentation Help

Pax1 - RP_090901_03_C08 - sagittal

Experiment
Gene	Pax1
Probe Type	RNA
Probe Orientation	Antisense
Plane of Section	sagittal
Treatments	ISH

Specimen 350-8539
Organism	Mus musculus
Strain	C57BL/6J
Age	P4
Theiler Stage
Sex	M

Related Institute Data

Brain Explorer

View in 3D

Launch a high resolution viewer in a new window

See all the images in a contact sheet layout

? microns

Probe RP_090901_03_C08
Type	RNA	Orientation	Antisense
NCBI Accession	NM_008780.1	Forward Primer	CACATTCAGTCAGCAACATCCT
GI	6679208	Reverse primer	GCAGGAGTCTCTCTCCGAACTA
Sequence: CACATTCAGTCAGCAACATCCTGGGCATCCGGACGTTTATGGAGCAAACAGGGGCCCTAACAGGGAGCGAAGGCGCTGCCTACTCCCCCAAGATGGAAGACTGGGCGGGTGTGAACCGTGCGGCCTTCCCCACCTCGCCAGCAGTGAATGGACTCGAGAAACCTGCCTTGGAGGCAGACATTAAATATACTCAGCTGGCTTCCAGCCTCTCCGCAGTGGGAGGCTTCCTTCCTGCCTGCGCCTACCCGGCTTCCAACCAGCAGGGAGTATACAGCGCTCCAGCAGCCGGCTACCTATCTCCCGGCCCGCCCTGGCCACCAGCCCAGGCACCCCCACTGACGCCCCACGGAGCTGGTGTGGCGGTGCACGGCGGGGAGCTTGCAGCGGCAATGACCTTCAAACACCGAGAAGGGACCGACCGGAAGCCCCCCAGCCCGGGAGGCAAGGCCACGGATGCACTCGGTAGCTTACACGGACTGCCCATCCCAGCCTCGACCTCCTAGGGGCTGTCCTCTCACAGAGCCACAGCCCGGTTCAGAGGAGCCGGCCGGGAGTGCAGCTCAGCTCATTCGACCTCTGCACCTCTGCGCTAGCAGCATCCTGGAGTTGGGGCCCCGGCATTGCTTTGGTCTCAACAGTTCCGCCGGTGCTTCCTTCAGGAAACCCTGGAATTTTTTAGGTCTTTCCGAGTCTTGGTTTTAGATGGCTACATTCTCCTAACCTTCCTAGTTCGGAGAGAGACTCCTG

This data is also available as XML

Is Brain Explorer installed?

Brain Explorer is a desktop application for viewing brain anatomy and gene expression in 3D.

Choose "Download" to proceed to the Brain Explorer download page.

Choose "View Data" if you have already installed Brain Explorer.